/*=========================================================================

  Program:   Visualization Toolkit
  Module:    vtkComputeHistogram2DOutliers.h

  Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
  All rights reserved.
  See Copyright.txt or http://www.kitware.com/Copyright.htm for details.

     This software is distributed WITHOUT ANY WARRANTY; without even
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
     PURPOSE.  See the above copyright notice for more information.

=========================================================================*/
/*-------------------------------------------------------------------------
  Copyright 2009 Sandia Corporation.
  Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
  the U.S. Government retains certain rights in this software.
-------------------------------------------------------------------------*/
/**
 * @class   vtkComputeHistogram2DOutliers
 * @brief   compute the outliers in a set
 *  of 2D histograms and extract the corresponding row data.
 *
 *
 *  This class takes a table and one or more vtkImageData histograms as input
 *  and computes the outliers in that data.  In general it does so by
 *  identifying histogram bins that are removed by a median (salt and pepper)
 *  filter and below a threshold.  This threshold is automatically identified
 *  to retrieve a number of outliers close to a user-determined value.  This
 *  value is set by calling SetPreferredNumberOfOutliers(int).
 *
 *  The image data input can come either as a multiple vtkImageData via the
 *  repeatable INPUT_HISTOGRAM_IMAGE_DATA port, or as a single
 *  vtkMultiBlockDataSet containing vtkImageData objects as blocks.  One
 *  or the other must be set, not both (or neither).
 *
 *  The output can be retrieved as a set of row ids in a vtkSelection or
 *  as a vtkTable containing the actual outlier row data.
 *
 * @sa
 *  vtkExtractHistogram2D vtkPComputeHistogram2DOutliers
 *
 * @par Thanks:
 *  Developed by David Feng at Sandia National Laboratories
 *------------------------------------------------------------------------------
 */

#ifndef vtkComputeHistogram2DOutliers_h
#define vtkComputeHistogram2DOutliers_h
//------------------------------------------------------------------------------
#include "vtkFiltersImagingModule.h" // For export macro
#include "vtkSelectionAlgorithm.h"

//------------------------------------------------------------------------------
class vtkCollection;
class vtkDoubleArray;
class vtkIdTypeArray;
class vtkImageData;
class vtkTable;
//------------------------------------------------------------------------------
class VTKFILTERSIMAGING_EXPORT vtkComputeHistogram2DOutliers : public vtkSelectionAlgorithm
{
public:
  static vtkComputeHistogram2DOutliers* New();
  vtkTypeMacro(vtkComputeHistogram2DOutliers, vtkSelectionAlgorithm);
  void PrintSelf(ostream& os, vtkIndent indent) override;

  vtkSetMacro(PreferredNumberOfOutliers, int);
  vtkGetMacro(PreferredNumberOfOutliers, int);

  //
  vtkTable* GetOutputTable();

  enum InputPorts
  {
    INPUT_TABLE_DATA = 0,
    INPUT_HISTOGRAMS_IMAGE_DATA,
    INPUT_HISTOGRAMS_MULTIBLOCK
  };
  enum OutputPorts
  {
    OUTPUT_SELECTED_ROWS = 0,
    OUTPUT_SELECTED_TABLE_DATA
  };

  /**
   * Set the source table data, from which data will be filtered.
   */
  void SetInputTableConnection(vtkAlgorithmOutput* cxn)
  {
    this->SetInputConnection(INPUT_TABLE_DATA, cxn);
  }

  /**
   * Set the input histogram data as a (repeatable) vtkImageData
   */
  void SetInputHistogramImageDataConnection(vtkAlgorithmOutput* cxn)
  {
    this->SetInputConnection(INPUT_HISTOGRAMS_IMAGE_DATA, cxn);
  }

  /**
   * Set the input histogram data as a vtkMultiBlockData set
   * containing multiple vtkImageData objects.
   */
  void SetInputHistogramMultiBlockConnection(vtkAlgorithmOutput* cxn)
  {
    this->SetInputConnection(INPUT_HISTOGRAMS_MULTIBLOCK, cxn);
  }

protected:
  vtkComputeHistogram2DOutliers();
  ~vtkComputeHistogram2DOutliers() override;

  int PreferredNumberOfOutliers;
  vtkTimeStamp BuildTime;

  int RequestData(vtkInformation*, vtkInformationVector**, vtkInformationVector*) override;

  int FillInputPortInformation(int port, vtkInformation* info) override;
  int FillOutputPortInformation(int port, vtkInformation* info) override;

  /**
   * Compute the thresholds (essentially bin extents) that contain outliers for
   * a collection of vtkImageData histograms.
   */
  virtual int ComputeOutlierThresholds(vtkCollection* histograms, vtkCollection* thresholds);

  /**
   * Compute the thresholds (bin extents) that contain outliers for a single vtkImageData histogram
   */
  virtual int ComputeOutlierThresholds(
    vtkImageData* histogram, vtkDoubleArray* thresholds, double threshold);

  /**
   * Take a set of range thresholds (bin extents) and filter out rows from the input table data that
   * fits inside those thresholds.
   */
  virtual int FillOutlierIds(
    vtkTable* data, vtkCollection* thresholds, vtkIdTypeArray* rowIds, vtkTable* outTable);

private:
  vtkComputeHistogram2DOutliers(const vtkComputeHistogram2DOutliers&) = delete;
  void operator=(const vtkComputeHistogram2DOutliers&) = delete;
};

#endif
